The module system
The various software packages installed at UPPMAX are made available to the clusters through a system of modules. The following is a short guide of how to use the lmod module system, through the module command.
List all available modules
module avail
List all available versions of a specific module
module avail [module name]
Search for modules based on a search-term
module spider [some search term]
List currently loaded modules
module list
Load a module
module load [modulename]
Unload a module
module unload [modulename]
Make bioinformatics modules available
to make bioinformatics modules available, run:
module load bioinfo-tools
Then you can load bioinformatics software modules.